Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891054.1_cds_XP_016445756.1_40685
CDS Infomation

[gene=LOC107770943] [db_xref=GeneID:107770943] [protein=SMR domain-containing protein At5g58720-like isoform X2] [protein_id=XP_016445756.1] [location=complement(join(32228..32356,32564..32634,32736..32842,32929..32996,34240..34296,34404..34480,35020..35258,36074..36159,39186..39211,39874..40426))] [gbkey=CDS]
Sequence

ATGAAGCACCAGAAGAAGAAGAAGAAGAGATCAAAAGCTTCTAAACAAGGCGATGTTGTT
AATGGTTCTGATAATAGCAAAGTAGGGGAGAGTAGTGTTTTAAAGGTTTTAACGGATGCG
TTTAGCTCTGTATCTGTAGAGGAAGCAGAATGTGCTTATAAAGAGGCAAATGGAAACTTG
AATAAAGCGATGAATATTCTGAGTGATTTGCTGGAGCGTGAGGAAGAGGACAAGATCACG
AGCTGCTCAAGCTCGAGTGGGAATGTCGGTTCGAGCTTGGATTCGAGTAACAACTCAGAC
ATGTTTGTTGGGGGTCAATCGCTGCAGAATTCGTCTCAGCGCAAGGCTAAGACAAAGAAA
TTGGTAGCTGCTGCAGGAACAGTCTCAACGATGATAGGGAAGGATTACGTGAGGTCAATT
CCGAAGAAGAGTTGTTCAAAATTCAAGGGTTTAAGTGATGAAACGGCGAGCAATGACGAT
GTTGAGCAGTTTTTGTGTTCCATGCTTGGGGAGGACTCTGCTTTGAGCTTAGCTGTTGTC
AGAGATGTTCTATGTCAATGCGGATACGAAGTTGAGAAGTTTACTGATAGGACATCTGAT
TCTACGTCTCATTCATCTGAAGGGGAATTTCAAGATAATGTGTGGTTTTGGGGGCATCCT
GGCAGGAATCAGTCAAAAAGTCTTGCAGGAAACTTCACGCATTCTTCATCATCTGCATCA
GGAAATTCTGGGCCAGAACTTCCTCATGAGATCTTGGAATCTTTGTTTAATATGCCAACC
CCTAAGAGTGCTGAGCACGAACCAACTACTATGAACTGGAAGAATGTTGTGAAGAAAATG
ACATCTTTGGGACGAAGGTTTGAATCTTGTCCTAATGATAGTCCACCACCGCAGCATAGC
CATGTTGAGGGAGCTGAGTATCATCTGTTCCGTGAAGCTTCAAAGCAACACTGGGAGTCA
ATGAAATCCCATTATCAGAAGGCTACAACAGCTTTTTCAAATGGCCAGAAGGAATATGCT
GCCTATCTTGCAGACCAGGGCTGGCTACATAACAGAAAGGCTCAAGAGGCTGATGAGAAA
GCTAGCCAGGATATATTTGCAGCCAGAAACAAGAATATAGAAAACATGATAACTATTGAT
TTGCATGGGCAACATGTTAAACCAGCAATGAGGCTTATGAAACTTCACCTTCTGTTTGGA
GCATATGTACGATCTGTTCGGTTGTTTAGGGTTATCACAGGATGTGGGATGCATGGTGTT
GGGAAGTCAAAACTGAAAACTTCGGTAATTGCGCTTTTGAAGAAAGAACGTATTGAATGG
ACTGAGGAGAATAGAGGAACATTGCTCATCAAGCTCGATGGACGAATGAATTTTAGCTTT
CTAGATTCTGATGATGATGATGATGATAGCTGA

Peptide Sequence

PEP ID

XP_016445756.1
PEP Infomation

PREDICTED: SMR domain-containing protein At5g58720-like isoform X2 [Nicotiana tabacum]
Sequence

MKHQKKKKKRSKASKQGDVVNGSDNSKVGESSVLKVLTDAFSSVSVEEAECAYKEANGNL
NKAMNILSDLLEREEEDKITSCSSSSGNVGSSLDSSNNSDMFVGGQSLQNSSQRKAKTKK
LVAAAGTVSTMIGKDYVRSIPKKSCSKFKGLSDETASNDDVEQFLCSMLGEDSALSLAVV
RDVLCQCGYEVEKFTDRTSDSTSHSSEGEFQDNVWFWGHPGRNQSKSLAGNFTHSSSSAS
GNSGPELPHEILESLFNMPTPKSAEHEPTTMNWKNVVKKMTSLGRRFESCPNDSPPPQHS
HVEGAEYHLFREASKQHWESMKSHYQKATTAFSNGQKEYAAYLADQGWLHNRKAQEADEK
ASQDIFAARNKNIENMITIDLHGQHVKPAMRLMKLHLLFGAYVRSVRLFRVITGCGMHGV
GKSKLKTSVIALLKKERIEWTEENRGTLLIKLDGRMNFSFLDSDDDDDDS

Transcript Sequence

Gene sequence data has not been registered.